Center for Cancer Computational Biology
Dana Farver Cancer Institute

RESOURCES

 

Array Express Data Submission Services
The Center provides assistance with Array Express Data Submission. Download this example spreadsheet. Contact the Center to find assistance filling out this spreadsheet.

 

Lung Genomics Research Consortium Lanches Website
Boston, MA, August 2, 2010 — The Lung Genomics Research Consortium (LGRC) today launched its public awareness website, which highlights the Consortium’s recently established research initiative to study lung disease, including chronic obstructive pulmonary disease (COPD) and interstitial lung disease (ILD), at the genetic and genomic levels. COPD is the fourth leading cause of death in Americans, while ILD, which includes pulmonary fibrosis, kills approximately 400,000 Americans each year.

Visit www.lung-genomics.org

 

TOOLS

 

GeneSigDB Software Release 2.0.0 now available
The Gene Signature DataBase is a searchable database of fully traceable, standardized, annotated gene signatures which have been manually curated from publications that are indexed in PubMed.

The Gene Signature DataBase

 

MeV v4.6 Release now available
MultiExperiment Viewer (MeV) is a Java application designed to allow the analysis of microarray data to identify patterns of gene expression and differentially expressed genes.

MeV


The Automated Microarray Pipeline
AMP is used to perform normalization and quality control measures on microarray experiments.

AMP

 

GeneChip Oncology Database
GCOD is a collection of publicly available microarray gene expression data on Affymetrix GeneChip arrays related to human cancers.

GCOD